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FabledScribe/src/scribe/services/dedup.py
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feat(snippets): near-duplicate finder — surface the sets worth merging
#231's premise was unifying reusable things already scattered as one-offs.
The create gate PREVENTS a new duplicate and merge_snippets CURES one you
point it at, but nothing FOUND the duplicates already in the record —
someone had to notice them by hand, which is the exact failure the Drafter
exists to remove.

One indexed self-join over note_embeddings, not an N² Python scan:
pgvector's cosine distance is the same operator semantic search uses, so a
similarity floor is a distance ceiling and the work stays in Postgres.
`left.note_id < right.note_id` yields each unordered pair once and drops
the self-pair that would otherwise dominate the ranking.

Pairs are collapsed into merge SETS by connected components. Transitive on
purpose: A~B plus B~C puts all three together even when A and C don't
directly clear the bar, which is what merge actually does (it folds every
source into one survivor). The cost is that a chain of mild resemblances
can rope in a member that isn't really alike — so the UI presents a set as
a proposal, shows the members, and never merges without a confirm.

Two scope decisions worth naming:

- OWN snippets only. merge_snippets requires one owner across the set, so
  surfacing someone else's would propose a merge that cannot be performed.
  The report is bounded by what the operator can act on, not what they can
  see.

- Threshold defaults to 0.82, LOOSER than the write gate's 0.90, and is a
  setting rather than a constant (rule #25). The gate blocks a create and
  has to be unforgiving of noise; this only suggests a merge under review,
  so it must reach further or it would never surface the pairs the gate
  already let through — which are precisely the ones that accumulated.

Fixes a real bug in the merge flow while wiring the UI: selectedList
filtered the selection against the CURRENT PAGE, and doMerge derives its
source ids from that list. A corpus-wide suggested group with off-page
members would have rendered incomplete and silently merged only the
visible subset. A group under review is now the authority for that list.

Refs #2088

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01UaYUaouG9jjhATyuxCKrQs
2026-07-28 18:32:40 -04:00

344 lines
15 KiB
Python

"""Write-time near-duplicate detection — the update-over-create gate.
Goal: stop a second near-identical row from being created when an existing one
should be UPDATED instead. Duplicates bloat the store and, worse, get surfaced
by semantic search (RAG) later as competing/stale copies that then have to be
reconciled. This is the enforcement half of the instruction-level "prefer
updating over creating" reflex.
OPT-IN by design: the interactive create paths (MCP create tools + REST create
routes) run this gate; internal/programmatic creates do NOT (e.g. a recurring
task spawning its next instance, or a bulk import — those legitimately repeat a
title and must not be blocked). Callers that want the gate call find_duplicate_*
themselves and act on a hit; nothing here mutates.
Two signals, both scoped to the same owner + project + kind:
1. Normalized-title exact match — cheap, always checked.
2. Semantic similarity (cosine ≥ _SEMANTIC_THRESHOLD) — only when the incoming
body is substantial. Short/title-only embeddings sit in a tight neighborhood
and false-positive (the pre-pivot lesson: "Lore: Shell 0" vs
"Lore: Reinitialization 0" matched at 0.91 with no body), so we gate it on
a minimum body length.
"""
from __future__ import annotations
import logging
from dataclasses import dataclass
from sqlalchemy import func, select
from sqlalchemy.orm import aliased
from scribe.models import async_session
from scribe.models.embedding import NoteEmbedding
from scribe.models.note import Note
from scribe.models.rulebook import Rule
from scribe.services import embeddings as embeddings_svc
# Imported rather than redeclared: no service imports this module (the create
# gate is called from the routes/tools layer), so there is no cycle to dodge,
# and a second copy of the constant is a thing to drift.
from scribe.services.snippets import SNIPPET_NOTE_TYPE
logger = logging.getLogger(__name__)
# Run the semantic check only when the incoming body has at least this many
# characters — below it, embeddings are dominated by the title and false-positive.
_MIN_BODY_FOR_SEMANTIC = 200
# Cosine threshold for "this is the same thing, reworded." Deliberately high to
# keep false positives rare (a hard block with a force-override is unforgiving of
# noise). Matches the 0.90 the pre-pivot dedup settled on.
_SEMANTIC_THRESHOLD = 0.90
@dataclass
class DuplicateMatch:
"""An existing record judged a near-duplicate of an incoming create."""
id: int
title: str
similarity: float # 1.0 for an exact normalized-title match
reason: str # "title" | "semantic"
def duplicate_response(dup: "DuplicateMatch", kind: str) -> dict:
"""Standard 'blocked — update instead' payload returned by a create tool
when the gate finds a near-duplicate. `kind` is 'note' or 'task' (drives the
update_<kind> hint)."""
return {
"duplicate": True,
"existing_id": dup.id,
"existing_title": dup.title,
"similarity": dup.similarity,
"match": dup.reason,
"message": (
f'A {dup.reason}-similar {kind} already exists (id {dup.id}: '
f'"{dup.title}"). Prefer UPDATING it (update_{kind}) over creating a '
f"near-duplicate. If this really is a distinct {kind}, retry with "
f"force=true."
),
}
async def find_duplicate_note(
user_id: int,
title: str,
body: str = "",
project_id: int | None = None,
is_task: bool | None = None,
note_type: str = "note",
) -> DuplicateMatch | None:
"""Best near-duplicate of (title, body) within the same owner + project +
kind, or None. Title match first (cheap, exact), then semantic when the body
is long enough to be meaningful. Never raises — embedder failure degrades to
title-only (callers should still be able to create)."""
norm = " ".join((title or "").split()).lower()
# --- Signal 1: normalized-title exact match (same scope) ---
# Fail-open: a dedup-check failure (DB down, etc.) must never block a
# legitimate create — degrade to "no duplicate found" and let it through.
if norm:
try:
async with async_session() as session:
stmt = select(Note).where(
Note.user_id == user_id,
Note.deleted_at.is_(None),
Note.note_type == note_type,
func.lower(func.trim(Note.title)) == norm,
)
if project_id is not None:
stmt = stmt.where(Note.project_id == project_id)
else:
stmt = stmt.where(Note.project_id.is_(None))
if is_task is True:
stmt = stmt.where(Note.status.isnot(None))
elif is_task is False:
stmt = stmt.where(Note.status.is_(None))
existing = (await session.execute(stmt.limit(1))).scalars().first()
if existing is not None:
return DuplicateMatch(existing.id, existing.title, 1.0, "title")
except Exception:
logger.debug("dedup title check skipped — query failed", exc_info=True)
return None
# --- Signal 2: semantic similarity (only with a substantial body) ---
if body and len(body.strip()) >= _MIN_BODY_FOR_SEMANTIC:
query = f"{title}\n{body}".strip()
# Scope the semantic check the same way as the title check: a record in
# project P compares only to P; a project-less (orphan) record compares
# only to other orphans (orphan_only), NOT across every project — without
# this, semantic_search_notes applies no project filter when project_id
# is None and would match an orphan note against any project's notes.
hits = await embeddings_svc.semantic_search_notes(
user_id, query, project_id=project_id, is_task=is_task,
orphan_only=(project_id is None),
limit=3, threshold=_SEMANTIC_THRESHOLD,
# Owner-only, deliberately: this gate BLOCKS a create and tells the
# caller to update the match instead. Matching someone else's record
# would refuse their write and point them at something they may not
# be able to edit.
scope="own",
)
for score, note in hits:
# semantic_search_notes doesn't filter note_type — enforce it here so
# a note doesn't shadow a task of the same wording, etc.
if note.note_type == note_type:
return DuplicateMatch(note.id, note.title, round(score, 3), "semantic")
return None
# --- corpus-wide near-duplicate report (#2088) -------------------------------
# The gate above PREVENTS a new duplicate; merge_snippets CURES one you point it
# at. Neither FINDS the duplicates already sitting in the record — someone had to
# notice them by hand, which is the exact failure the Drafter exists to remove.
#
# WHY OWN SNIPPETS ONLY. merge_snippets requires every record to share the
# target's owner (cross-owner merge is out of scope), so a report that surfaced
# someone else's snippet would propose a merge that cannot be performed. The
# scope here is set by what the operator can actually act on, not by what they
# can see.
#
# WHY A LOWER THRESHOLD THAN THE GATE. The gate BLOCKS a write at 0.90 and has to
# be unforgiving of noise. This report only makes a suggestion the operator
# reviews, so it can afford to be looser and catch the pairs the gate lets
# through — which are precisely the ones that accumulated. It is a setting rather
# than a constant (rule #25) because the right value depends on how uniform a
# corpus is, and nobody can guess that from here.
DUPLICATE_THRESHOLD_KEY = "kb_duplicate_threshold"
DUPLICATE_DEFAULT_THRESHOLD = 0.82
# Hard cap on returned pairs. A pathologically uniform corpus is O(n²) pairs, and
# a report nobody can read is not a report.
_MAX_DUPLICATE_PAIRS = 200
async def get_duplicate_threshold(user_id: int) -> float:
"""The user's near-duplicate similarity floor, clamped to [0, 1]."""
from scribe.services.settings import get_setting
try:
value = float(await get_setting(
user_id, DUPLICATE_THRESHOLD_KEY, str(DUPLICATE_DEFAULT_THRESHOLD)
))
except (TypeError, ValueError):
value = DUPLICATE_DEFAULT_THRESHOLD
return min(1.0, max(0.0, value))
def group_pairs(pairs: list[tuple[int, int, float]]) -> list[list[int]]:
"""Collapse similar-pairs into candidate merge SETS (connected components).
Pure and synchronous so the grouping rule is testable without a database.
Transitive on purpose: if A~B and B~C, all three land in one set even when
A and C fall below the threshold. That matches what merge does — it folds
every source into one survivor — and it avoids handing the operator three
overlapping pairs to reconcile by hand, which is the chore being removed.
The cost is that a chain of mild resemblances can rope in a pair that isn't
really alike; the operator sees the members and picks, so a set is a
proposal, never an action.
"""
parent: dict[int, int] = {}
def find(x: int) -> int:
parent.setdefault(x, x)
while parent[x] != x:
parent[x] = parent[parent[x]]
x = parent[x]
return x
def union(a: int, b: int) -> None:
ra, rb = find(a), find(b)
if ra != rb:
parent[rb] = ra
for left, right, _score in pairs:
union(left, right)
groups: dict[int, list[int]] = {}
for node in parent:
groups.setdefault(find(node), []).append(node)
# Biggest clusters first — the most tangled thing is the most worth fixing.
# Ids ascending within a set so the output is stable across runs.
return sorted((sorted(g) for g in groups.values() if len(g) > 1),
key=lambda g: (-len(g), g[0]))
async def find_duplicate_snippets(
user_id: int, *, threshold: float | None = None, limit: int = _MAX_DUPLICATE_PAIRS
) -> dict:
"""Near-duplicate snippets already in the record, grouped into merge sets.
One indexed self-join over `note_embeddings` rather than an N² Python scan:
pgvector's cosine distance is the same operator semantic search uses, so a
similarity floor is a distance ceiling and the work stays in Postgres.
Returns {"groups": [{"note_ids": [...], "snippets": [...], "top_score": f}],
"pairs": [...], "threshold": f}. Fail-open (an empty report) like the rest of
this module — a suggestion feature must not be able to break the page it
decorates.
"""
floor = await get_duplicate_threshold(user_id) if threshold is None else threshold
floor = min(1.0, max(0.0, floor))
max_distance = min(2.0, max(0.0, 1.0 - floor))
left = aliased(NoteEmbedding, name="left_emb")
right = aliased(NoteEmbedding, name="right_emb")
left_note = aliased(Note, name="left_note")
right_note = aliased(Note, name="right_note")
distance = left.embedding.cosine_distance(right.embedding)
pairs: list[tuple[int, int, float]] = []
try:
async with async_session() as session:
stmt = (
select(left.note_id, right.note_id, distance.label("distance"))
.select_from(left)
# `<` not `!=`: each unordered pair exactly once, and it drops
# the self-pair (distance 0) that would otherwise dominate.
.join(right, left.note_id < right.note_id)
.join(left_note, left_note.id == left.note_id)
.join(right_note, right_note.id == right.note_id)
.where(
left_note.note_type == SNIPPET_NOTE_TYPE,
right_note.note_type == SNIPPET_NOTE_TYPE,
left_note.deleted_at.is_(None),
right_note.deleted_at.is_(None),
# Owner-scoped on both sides — see the note above on why the
# report is bounded by what merge can actually act on.
left_note.user_id == user_id,
right_note.user_id == user_id,
distance <= max_distance,
)
.order_by(distance.asc())
.limit(max(1, limit))
)
rows = list((await session.execute(stmt)).all())
pairs = [(int(a), int(b), round(1.0 - float(d), 4)) for a, b, d in rows]
except Exception:
logger.warning("Near-duplicate snippet scan failed", exc_info=True)
return {"groups": [], "pairs": [], "threshold": floor}
if not pairs:
return {"groups": [], "pairs": [], "threshold": floor}
best: dict[tuple[int, int], float] = {(a, b): s for a, b, s in pairs}
grouped = group_pairs(pairs)
# Titles for presentation. One fetch for every id in the report.
ids = sorted({n for g in grouped for n in g})
titles: dict[int, str] = {}
try:
async with async_session() as session:
rows = (await session.execute(
select(Note.id, Note.title).where(Note.id.in_(ids))
)).all()
titles = {int(i): t for i, t in rows}
except Exception:
logger.debug("duplicate report titles unavailable", exc_info=True)
groups = []
for members in grouped:
scores = [
s for (a, b), s in best.items() if a in members and b in members
]
groups.append({
"note_ids": members,
"snippets": [
{"id": nid, "title": titles.get(nid, "")} for nid in members
],
# The strongest resemblance in the set — how confident the suggestion
# is, and what the list sorts on.
"top_score": max(scores) if scores else floor,
})
groups.sort(key=lambda g: (-g["top_score"], g["note_ids"][0]))
return {"groups": groups, "pairs": pairs, "threshold": floor}
async def find_duplicate_rule(
title: str,
topic_id: int | None = None,
project_id: int | None = None,
) -> DuplicateMatch | None:
"""Title-based near-duplicate of a rule, scoped to the same topic (a rulebook
rule) or the same project (a project rule). Rules aren't a semantic-retrieval
surface, so a normalized-title match is the right (and only) signal. Fail-open
like find_duplicate_note."""
norm = " ".join((title or "").split()).lower()
if not norm or (topic_id is None and project_id is None):
return None
try:
async with async_session() as session:
stmt = select(Rule).where(
Rule.deleted_at.is_(None),
func.lower(func.trim(Rule.title)) == norm,
)
if topic_id is not None:
stmt = stmt.where(Rule.topic_id == topic_id)
else:
stmt = stmt.where(Rule.project_id == project_id)
existing = (await session.execute(stmt.limit(1))).scalars().first()
if existing is not None:
return DuplicateMatch(existing.id, existing.title, 1.0, "title")
except Exception:
logger.debug("dedup rule title check skipped — query failed", exc_info=True)
return None